AMTR_s00029p00190880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.258

No description available


Gene families : OG0002719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002719_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00190880

Target Alias Description ECC score Gene Family Method Actions
Adi_g105443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G054400.1 Ceric.08G054400 not classified & original description: pacid=50638201... 0.05 OrthoFinder output from all 47 species
Dcu_g04146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024823001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_01281 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g07443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020564 No alias not classified & original description: CDS=1-2943 0.03 OrthoFinder output from all 47 species
Solyc09g031650.3.1 Solyc09g031650 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g04875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45301 PARL1, ATNUC-L1, NUC-L1 regulatory protein *(NCL) of rRNA transcription &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!