1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00029p00197310

AMTR_s00029p00197310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.269

Description : Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00197310
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263870 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.07 OrthoFinder output from all 47 species
AMTR_s00012p00263950 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00197600 evm_27.TU.AmTr_v1... Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
AT1G50050 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.04 OrthoFinder output from all 47 species
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
Ala_g21397 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52884.t1 Aspi01Gene52884 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05029 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G042000.1 Ceric.20G042000 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g27002 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13654 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20821 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25605 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33701 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g50580 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37917 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08251 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003762001 No alias STS14 protein OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
GSVIVT01036997001 PRB1, ATPRB1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
GSVIVT01037000001 ATPR1, PR1, PR 1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01038540001 PRB1, ATPRB1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.04 OrthoFinder output from all 47 species
Gb_11050 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_11051 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Gb_11053 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_11054 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_13683 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_20955 No alias Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os01g28450.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os02g27300.1 LOC_Os02g27300 Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os02g27310.1 LOC_Os02g27310 Cysteine-rich receptor-like protein kinase 6 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os02g54540.1 LOC_Os02g54540 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
LOC_Os02g54560.1 LOC_Os02g54560 Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.05 OrthoFinder output from all 47 species
LOC_Os04g22340.1 LOC_Os04g22340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03279.1 LOC_Os07g03279 Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03319.1 LOC_Os07g03319 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03409.1 LOC_Os07g03409 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03458.1 LOC_Os07g03458 Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03467.1 LOC_Os07g03467 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03499.1 LOC_Os07g03499 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03580.1 LOC_Os07g03580 Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03590.1 LOC_Os07g03590 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03610.1 ATPR1, PR1, PR... Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
LOC_Os07g03620.1 ATPR1, PR1, PR... Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03680.1 LOC_Os07g03680 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03710.1 LOC_Os07g03710 Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os07g03730.1 LOC_Os07g03730 Pathogenesis-related protein PRMS OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os07g03750.1 LOC_Os07g03750 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
LOC_Os10g11500.1 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
MA_10428480g0010 No alias Basic form of pathogenesis-related protein 1... 0.04 OrthoFinder output from all 47 species
MA_501572g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Mp3g21890.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.02 OrthoFinder output from all 47 species
Mp6g06560.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g00440.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Mp7g12470.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g38284 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44565 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g24600 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27336 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023422 No alias CAPE precursor polypeptide & original description: CDS=1-525 0.04 OrthoFinder output from all 47 species
Smo100429 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Smo101024 ATPR1, PR1, PR 1 Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare 0.04 OrthoFinder output from all 47 species
Smo101466 ATPR1, PR1, PR 1 Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Smo112379 PRB1, ATPRB1 Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
Smo230161 PRB1, ATPRB1 Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.03 OrthoFinder output from all 47 species
Solyc01g106605.1.1 Solyc01g106605 Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Solyc01g106620.2.1 PRB1, ATPRB1,... Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
Solyc09g006005.1.1 ATPR1, PR1, PR... Pathogenesis-related leaf protein 4 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Solyc09g007010.1.1 Solyc09g007010 Pathogenesis-related leaf protein 4 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Tin_g36983 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Zm00001e016075_P001 Zm00001e016075 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Zm00001e032757_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 35 153
No external refs found!