Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.415
No description available
Gene families : OG0004378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00029p00241590 | |
| Cluster | HCCA: Cluster_85 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01015545001 | No alias | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10426254g0010 | No alias | component mtRPL36 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c15_5230V3.1 | Pp3c15_5230 | Ribosomal protein L36 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g43807 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004129 | cytochrome-c oxidase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016675 | oxidoreductase activity, acting on a heme group of donors | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000473 | Ribosomal_L36 | 28 | 53 |
| No external refs found! |
