AMTR_s00030p00014690 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.3

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor

Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00030p00014690

Target	Alias	Description	ECC score	Gene Family Method
AT1G43700	SUE3, VIP1	VIRE2-interacting protein 1	0.02	OrthoFinder output from all 47 species
AT2G21230	No alias	Basic-leucine zipper (bZIP) transcription factor family protein	0.03	OrthoFinder output from all 47 species
Adi_g008976	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g099893	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10955	ATBZIP34, BZIP34	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g19337	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g07558	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g03872	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g02828	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05916	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07719	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_28106	No alias	Uncharacterized protein At4g06598 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os04g10260.1	LOC_Os04g10260	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
LOC_Os09g34060.1	LOC_Os09g34060	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Lfl_g28477	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g00600.1	No alias	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Msp_g00644	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g04890	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g04079	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo77868	No alias	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
Solyc01g110480.4.1	Solyc01g110480	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Spa_g10871	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e034722_P004	Zm00001e034722	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Zm00001e039435_P001	SUE3, VIP1,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016670	oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0030328	prenylcysteine catabolic process	IEP	HCCA
BP	GO:0030329	prenylcysteine metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	141	199

External Links

No external refs found!

AMTR_s00030p00014690 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation