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  5. AMTR_s00030p00122220

AMTR_s00030p00122220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.71

No description available


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00122220

Target Alias Description ECC score Gene Family Method Actions
AT3G08490 No alias BEST Arabidopsis thaliana protein match is: Late... 0.02 OrthoFinder output from all 47 species
AT3G24605 No alias No description available 0.02 OrthoFinder output from all 47 species
Aop_g00399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22107.t1 Aspi01Gene22107 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015303 No alias not classified & original description: CDS=675-1190 0.04 OrthoFinder output from all 47 species
Gb_09110 No alias microtubule-interacting component CC of cellulose... 0.02 OrthoFinder output from all 47 species
Gb_38619 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g44740.1 LOC_Os02g44740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10227167g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_7260V3.1 Pp3c16_7260 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.01 OrthoFinder output from all 47 species
Ppi_g62547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008965 No alias not classified & original description: CDS=1104-2096 0.03 OrthoFinder output from all 47 species
Sam_g08763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000854_P001 Zm00001e000854 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e015379_P001 Zm00001e015379 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 157 260
No external refs found!