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  5. AMTR_s00030p00186860

AMTR_s00030p00186860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.119

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor


Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00186860

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00261720 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bZIP... 0.05 OrthoFinder output from all 47 species
Ala_g19237 No alias bZIP class-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07122.t1 Aspi01Gene07122 bZIP class-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63080.t1 ATBZIP34,... bZIP class-L transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043074 No alias bZIP class-I transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g20246 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G070700.1 Ceric.12G070700 bZIP class-I transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.33G065900.1 Ceric.33G065900 bZIP class-I transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g01833 No alias bZIP class-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05723 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11306 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04714 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15043 ATBZIP34, BZIP34 bZIP class-L transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014246001 ATBZIP34, BZIP34 RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
GSVIVT01032683001 AtbZIP52, bZIP52 RNA biosynthesis.transcriptional activation.bZIP... 0.04 OrthoFinder output from all 47 species
Len_g17568 No alias bZIP class-I transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g23618 No alias bZIP class-L transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09064 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12096 No alias bZIP class-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014287 ATBZIP34, BZIP34 bZIP class-L transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018533 No alias bZIP class-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1006.g027904 No alias bZIP class-I transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo402651 ATBZIP61, BZIP61 RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
Solyc01g103873.1.1 Solyc01g103873 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Tin_g11893 ATBZIP61, BZIP61 bZIP class-L transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009082_P002 SUE3, VIP1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!