1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00030p00195240

AMTR_s00030p00195240 (CCR2, ATGRP7, GRP7,...)


Aliases : CCR2, ATGRP7, GRP7, GR-RBP7, evm_27.TU.AmTr_v1.0_scaffold00030.127

Description : Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00195240

Target Alias Description ECC score Gene Family Method Actions
Adi_g043489 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04517 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61147 GR-RBP4, GRP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50216.t1 GRP2, ATGRP2,... RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0328.g065292 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: CDS=40-945 0.02 OrthoFinder output from all 47 species
Cba_g05276 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G070400.1 CCR2, ATGRP7,... not classified & original description: pacid=50608368... 0.04 OrthoFinder output from all 47 species
Dac_g33383 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08529 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g26781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31555 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g61990.3 ATRZ-1A, LOC_Os03g61990 RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species
Mp6g08160.1 ATRZ-1A RNA chaperone (RZ1|GR-RBP) 0.04 OrthoFinder output from all 47 species
Ore_g32937 CCR2, ATGRP7,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61530 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 80
No external refs found!