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  5. AMTR_s00032p00050560

AMTR_s00032p00050560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.30

Description : Putative disease resistance protein At5g05400 OS=Arabidopsis thaliana


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00050560
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00238210 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g14610... 0.02 OrthoFinder output from all 47 species
AMTR_s00062p00106150 evm_27.TU.AmTr_v1... Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00078p00183570 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61310... 0.03 OrthoFinder output from all 47 species
AMTR_s00101p00133980 RFL1,... Disease resistance protein RFL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00125720 evm_27.TU.AmTr_v1... Probable disease resistance protein At1g61180... 0.02 OrthoFinder output from all 47 species
AMTR_s00215p00020550 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AT1G12290 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT4G27190 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
GSVIVT01020293001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_18201 No alias Probable disease resistance protein At1g61180... 0.02 OrthoFinder output from all 47 species
Gb_37091 No alias Probable disease resistance protein At1g15890... 0.05 OrthoFinder output from all 47 species
MA_10436071g0010 No alias Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
MA_112657g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_781140g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_90078g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp3g09180.1 No alias Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
Mp3g09210.1 No alias Probable disease resistance protein At4g27220... 0.01 OrthoFinder output from all 47 species
Pp3c19_2480V3.1 Pp3c19_2480 NB-ARC domain-containing disease resistance protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 1 118
No external refs found!