1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00032p00207060

AMTR_s00032p00207060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.198

No description available


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00207060
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT1G07220 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.03 OrthoFinder output from all 47 species
AT2G45830 DTA2 downstream target of AGL15 2 0.04 OrthoFinder output from all 47 species
AT3G61280 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.05 OrthoFinder output from all 47 species
Aev_g08297 DTA2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56702.t1 Aspi01Gene56702 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75570 DTA2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G011800.1 Ceric.04G011800 not classified & original description: pacid=50631423... 0.02 OrthoFinder output from all 47 species
Dcu_g32401 DTA2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026872001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026876001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01026877001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01026878001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_34473 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45140.1 LOC_Os04g45140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10425862g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10435424g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32961g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4631294g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g025770.4.1 Solyc03g025770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g50265 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024271_P001 Zm00001e024271 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040430_P002 Zm00001e040430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 110 497
No external refs found!