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  5. AMTR_s00033p00135640

AMTR_s00033p00135640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.70

No description available


Gene families : OG0001458 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001458_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00135640

Target Alias Description ECC score Gene Family Method Actions
AT5G67020 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
Ceric.17G009400.1 Ceric.17G009400 not classified & original description: pacid=50618164... 0.04 OrthoFinder output from all 47 species
Ceric.17G057400.1 Ceric.17G057400 not classified & original description: pacid=50618321... 0.04 OrthoFinder output from all 47 species
GSVIVT01022129001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_01934 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g28340.1 LOC_Os09g28340 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g03310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014241 No alias not classified & original description: CDS=1-2076 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016005 No alias not classified & original description: CDS=1-1116 0.02 OrthoFinder output from all 47 species
Spa_g17398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA

No InterPro domains available for this sequence

No external refs found!