1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00033p00142400

AMTR_s00033p00142400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.84

No description available


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00142400
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT4G14819 No alias Protein of unknown function (DUF1677) 0.03 OrthoFinder output from all 47 species
AT5G25840 No alias Protein of unknown function (DUF1677) 0.02 OrthoFinder output from all 47 species
Adi_g058493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14398 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os05g44410.1 LOC_Os05g44410 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g28700.1 LOC_Os10g28700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10642 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_140731g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_23866g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_25927g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9276027g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g48399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g120920.1.1 Solyc03g120920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054130.1.1 Solyc06g054130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g46414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49689 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012322_P001 Zm00001e012322 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030672_P001 Zm00001e030672 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 46 133
No external refs found!