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  5. AMTR_s00036p00166880

AMTR_s00036p00166880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.82

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00166880

Target Alias Description ECC score Gene Family Method Actions
AT1G17520 No alias Homeodomain-like/winged-helix DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Cba_g12893 ATTRB1, TRB1 PRC2-recruiting factor (TRB) of PRC2 histone methylation... 0.02 OrthoFinder output from all 47 species
GSVIVT01015170001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Zm00001e020011_P001 Zm00001e020011 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003682 chromatin binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 5 55
IPR005818 Histone_H1/H5_H15 117 180
No external refs found!