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  5. AMTR_s00036p00213460

AMTR_s00036p00213460


Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00213460
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G72900 No alias Toll-Interleukin-Resistance (TIR) domain-containing protein 0.04 OrthoFinder output from all 47 species
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT3G04220 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G09430 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G18350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G40060 No alias Disease resistance protein (NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G40090 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46270 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Adi_g066110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083862 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g04457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45494.t1 Aspi01Gene45494 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G017300.1 Ceric.15G017300 not classified & original description: pacid=50640848... 0.03 OrthoFinder output from all 47 species
Ehy_g25372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020983001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16090 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_32215 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_40546 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
LOC_Os12g31160.1 RPP13, LOC_Os12g31160 no description available(sp|p0do08|pikm2_orysj : 295.0) 0.01 OrthoFinder output from all 47 species
MA_10434300g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_12346g0030 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Pir_g36302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46217 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063360.1.1 Solyc07g063360 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc09g092410.4.1 Solyc09g092410 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Solyc12g096900.2.1 AtPP2-B10,... effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Zm00001e035278_P001 Zm00001e035278 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 5 135
IPR002182 NB-ARC 140 225
IPR001611 Leu-rich_rpt 735 755
IPR001611 Leu-rich_rpt 435 457
IPR001611 Leu-rich_rpt 602 623
No external refs found!