Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.165
Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component
Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G11200 | No alias | DEAD/DEAH box RNA helicase family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g055943 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069281 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g085033 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13080 | No alias | helicase UAP56 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g52184 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12256 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001376.21 | No alias | DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43300 | No alias | helicase UAP56 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14863 | No alias | RNA helicase (Sub2). helicase component UAP56 of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g36920.2 | LOC_Os01g36920 | RNA helicase (Sub2). helicase component UAP56 of... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g56014 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_99733g0010 | No alias | RNA helicase (Sub2). helicase component UAP56 of... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g02350.1 | No alias | RNA helicase (Sub2). helicase component UAP56 of... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g07693 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c7_5890V3.1 | Pp3c7_5890 | DEAD/DEAH box RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g49064 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40258 | No alias | helicase UAP56 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51328 | No alias | helicase UAP56 & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g066060.3.1 | Solyc06g066060 | RNA helicase (Sub2). helicase component UAP56 of... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc08g061000.4.1 | Solyc08g061000 | RNA helicase (Sub2). helicase component UAP56 of... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026684_P001 | Zm00001e026684 | RNA helicase (Sub2). helicase component UAP56 of... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027715_P001 | Zm00001e027715 | RNA helicase (Sub2). helicase component UAP56 of... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0004386 | helicase activity | IEA | Interproscan |
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004055 | argininosuccinate synthase activity | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| BP | GO:0006525 | arginine metabolic process | IEP | HCCA |
| BP | GO:0006526 | arginine biosynthetic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0046854 | phosphatidylinositol phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0051258 | protein polymerization | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| No external refs found! |
