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  5. AMTR_s00036p00227770

AMTR_s00036p00227770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.169

Description : Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component


Gene families : OG0001034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00227770

Target Alias Description ECC score Gene Family Method Actions
Adi_g004992 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Aop_g08737 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Aspi01Gene12385.t1 ATTOC132,... component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Azfi_s0241.g059738 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.04 OrthoFinder output from all 47 species
Cba_g19707 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Cre17.g734300 No alias Translocase of chloroplast 90, chloroplastic... 0.01 OrthoFinder output from all 47 species
Len_g35853 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
MA_118221g0010 ATTOC132, TOC132 Translocase of chloroplast 132, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_25261g0020 ATTOC132, TOC132 Translocase of chloroplast 120, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g47631 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Pir_g07688 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Ppi_g08527 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2879.g028484 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.02 OrthoFinder output from all 47 species
Solyc01g080780.2.1 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.03 OrthoFinder output from all 47 species
Solyc07g007650.3.1 Solyc07g007650 component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.04 OrthoFinder output from all 47 species
Tin_g13159 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Zm00001e006277_P001 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species
Zm00001e029743_P002 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR024283 TOC159_MAD 510 774
IPR006703 G_AIG1 171 321
No external refs found!