Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.159
Description : Pectinesterase QRT1 OS=Arabidopsis thaliana
Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00038p00206660 | |
| Cluster | HCCA: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00264470 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00007p00264500 | evm_27.TU.AmTr_v1... | Pectinesterase PPME1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT5G18990 | No alias | Pectin lyase-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028170001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41518 | No alias | Probable pectinesterase 8 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005618 | cell wall | IEA | Interproscan |
| MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
| BP | GO:0042545 | cell wall modification | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000070 | Pectinesterase_cat | 6 | 82 |
| No external refs found! |
