1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00038p00239660

AMTR_s00038p00239660 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11, evm_27.TU.AmTr_v1.0_scaffold00038.249

Description : ABC transporter G family member 11 OS=Arabidopsis thaliana


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00239660

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00325p00013820 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G51460 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT1G51500 D3, CER5,... ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G21090 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
Aev_g23241 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04432 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19934 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13814 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53383.t2 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19304 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04054 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45147 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09105 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07801 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05238 ATWBC11, ABCG11,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Gb_18495 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_26722 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os10g08014.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10430884g0010 No alias ABC transporter G family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10436774g0020 ATWBC11, ABCG11,... ABC transporter G family member 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g16700.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018711 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=1249-3375 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1312.g027986 ATWBC11, ABCG11,... not classified & original description: CDS=352-2547 0.02 OrthoFinder output from all 47 species
Sam_g07489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g009100.2.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g12541 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 22 84
No external refs found!