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  5. AMTR_s00039p00194530

AMTR_s00039p00194530 (NCED3, SIS7, STO1,...)


Aliases : NCED3, SIS7, STO1, ATNCED3, evm_27.TU.AmTr_v1.0_scaffold00039.158

Description : Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00194530
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256600 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.03 OrthoFinder output from all 47 species
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.06 OrthoFinder output from all 47 species
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.03 OrthoFinder output from all 47 species
Adi_g074127 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Adi_g126851 ATCCD1, CCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05406 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Als_g23969 ATNCED5, NCED5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21663 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aop_g28984 ATNCED9, NCED9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36988 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Aspi01Gene12676.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19977.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012346 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Azfi_s0862.g090081 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ceric.06G077400.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ceric.23G048100.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ceric.35G030200.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g12313 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g39217 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dcu_g39142 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dde_g23722 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
GSVIVT01029057001 NCED6, ATNCED6 Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
GSVIVT01038080001 NCED3, SIS7,... Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 OrthoFinder output from all 47 species
Gb_04986 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.02 OrthoFinder output from all 47 species
Gb_07367 NCED3, SIS7,... carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.03 OrthoFinder output from all 47 species
Gb_19071 NCED3, SIS7,... carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.03 OrthoFinder output from all 47 species
Gb_33716 ATNCED9, NCED9 Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44380.1 NCED3, SIS7,... neoxanthin cleavage protein 0.05 OrthoFinder output from all 47 species
Len_g38712 NCED3, SIS7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58979 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Msp_g05882 NCED3, SIS7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32214 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Spa_g26569 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Zm00001e012402_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Zm00001e032833_P001 ATNCED9, NCED9,... neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 112 579
No external refs found!