1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00215960

AMTR_s00039p00215960 (YUC8,...)


Aliases : YUC8, evm_27.TU.AmTr_v1.0_scaffold00039.187

Description : Phytohormones.auxin.synthesis.indole-3-pyruvic acid (IPyA) pathway.YUCCA-type flavin monooxygenase


Gene families : OG0000787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00215960

Target Alias Description ECC score Gene Family Method Actions
AMTR_s01333p00002250 YUC11,... Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.02 OrthoFinder output from all 47 species
AT1G04180 YUC9 YUCCA 9 0.07 OrthoFinder output from all 47 species
AT2G33230 YUC7 YUCCA 7 0.02 OrthoFinder output from all 47 species
AT4G28720 YUC8 Flavin-binding monooxygenase family protein 0.04 OrthoFinder output from all 47 species
Ceric.01G116200.1 YUC5, SUPER1,... flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02209 YUC5, SUPER1 flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g01534 YUC9 flavin-dependent monooxygenase *(YUCCA) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01009989001 YUC10 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.02 OrthoFinder output from all 47 species
GSVIVT01011006001 YUC10 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.08 OrthoFinder output from all 47 species
GSVIVT01028471001 YUC8 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.03 OrthoFinder output from all 47 species
GSVIVT01035678001 YUC6 Phytohormones.auxin.synthesis.indole-3-pyruvic acid... 0.02 OrthoFinder output from all 47 species
Gb_40961 YUC5, SUPER1 flavin monooxygenase (YUCCA) 0.07 OrthoFinder output from all 47 species
LOC_Os04g03980.1 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.04 OrthoFinder output from all 47 species
LOC_Os05g45240.1 YUC2, LOC_Os05g45240 flavin monooxygenase (YUCCA) 0.06 OrthoFinder output from all 47 species
LOC_Os07g25540.1 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.02 OrthoFinder output from all 47 species
Len_g48683 YUC4 flavin-dependent monooxygenase *(YUCCA) & original... 0.03 OrthoFinder output from all 47 species
MA_215174g0010 YUC9 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Solyc06g083700.4.1 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Solyc09g064160.3.1 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.02 OrthoFinder output from all 47 species
Zm00001e008767_P001 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.04 OrthoFinder output from all 47 species
Zm00001e009691_P002 YUC9, Zm00001e009691 flavin monooxygenase (YUCCA) 0.03 OrthoFinder output from all 47 species
Zm00001e020334_P001 YUC4, Zm00001e020334 flavin monooxygenase (YUCCA) 0.05 OrthoFinder output from all 47 species
Zm00001e040571_P001 YUC5, SUPER1,... flavin monooxygenase (YUCCA) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR020946 Flavin_mOase-like 21 329
No external refs found!