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  5. AMTR_s00040p00044580

AMTR_s00040p00044580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.21

No description available


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00044580

Target Alias Description ECC score Gene Family Method Actions
AT3G62210 EDA32 Putative endonuclease or glycosyl hydrolase 0.02 OrthoFinder output from all 47 species
AT5G09840 No alias Putative endonuclease or glycosyl hydrolase 0.05 OrthoFinder output from all 47 species
AT5G64710 No alias Putative endonuclease or glycosyl hydrolase 0.03 OrthoFinder output from all 47 species
Aev_g39952 EDA32 endoribonuclease *(MNU) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43923.t1 Aspi01Gene43923 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g06680.2 LOC_Os11g06680 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g11787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo419584 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 22 155
IPR025605 OST-HTH/LOTUS_dom 227 290
No external refs found!