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  5. AMTR_s00040p00069280

AMTR_s00040p00069280 (CAD6, ATCAD6,...)


Aliases : CAD6, ATCAD6, evm_27.TU.AmTr_v1.0_scaffold00040.35

Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG0000208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00069280
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Adi_g013171 CAD5, ATCAD5, CAD-5 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aev_g32499 ELI3-2, ATCAD8,... EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aop_g09756 CAD6, ATCAD6 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01003150001 ATCAD4, CAD-C, CAD, CAD4 Cell wall.lignin.monolignol synthesis.cinnamyl-alcohol... 0.03 OrthoFinder output from all 47 species
Sam_g50012 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Spa_g48328 ATCAD9, CAD9 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Zm00001e040022_P001 ELI3-2, ATCAD8,... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR013154 ADH-like_N 9 123
No external refs found!