1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00040p00148670

AMTR_s00040p00148670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.120

Description : Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00148670
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g011057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g41750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G040000.1 Ceric.03G040000 not classified & original description: pacid=50571445... 0.04 OrthoFinder output from all 47 species
Ceric.1Z032000.1 Ceric.1Z032000 not classified & original description: pacid=50577072... 0.03 OrthoFinder output from all 47 species
Ceric.1Z062000.1 Ceric.1Z062000 not classified & original description: pacid=50604721... 0.02 OrthoFinder output from all 47 species
Dcu_g38146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01651 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_24628 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33880.1 LOC_Os08g33880 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Msp_g24579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008612 No alias not classified & original description: CDS=1-753 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013142 No alias not classified & original description: CDS=1-786 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013704 No alias not classified & original description: CDS=1-681 0.02 OrthoFinder output from all 47 species
Sam_g34638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo150464 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e003512_P001 Zm00001e003512 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 124 162
IPR002653 Znf_A20 20 43
No external refs found!