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  5. AMTR_s00040p00156520

AMTR_s00040p00156520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.131

No description available


Gene families : OG0003208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00156520
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00157890 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G52790 No alias peptidoglycan-binding LysM domain-containing protein 0.07 OrthoFinder output from all 47 species
AT5G62150 No alias peptidoglycan-binding LysM domain-containing protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene06813.t1 Aspi01Gene06813 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11452.t1 Aspi01Gene11452 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69403.t1 Aspi01Gene69403 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G111400.1 Ceric.02G111400 not classified & original description: pacid=50586243... 0.03 OrthoFinder output from all 47 species
Ceric.19G057000.1 Ceric.19G057000 not classified & original description: pacid=50575271... 0.03 OrthoFinder output from all 47 species
Ceric.19G057500.1 Ceric.19G057500 not classified & original description: pacid=50575586... 0.02 OrthoFinder output from all 47 species
Ceric.1Z233900.1 Ceric.1Z233900 not classified & original description: pacid=50628265... 0.05 OrthoFinder output from all 47 species
Ceric.1Z314900.1 Ceric.1Z314900 not classified & original description: pacid=50582127... 0.05 OrthoFinder output from all 47 species
Dcu_g24473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39268 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g02685.1 LOC_Os03g02685 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g06968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10325924g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_157865g0010 AAc1, ACT1 Actin-1 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
MA_427792g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_58010g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_7790149g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g20364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g026370.1.1 Solyc03g026370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g083410.1.1 Solyc10g083410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e000131_P001 Zm00001e000131 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e002154_P001 Zm00001e002154 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 54 95
No external refs found!