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  5. AMTR_s00040p00164470

AMTR_s00040p00164470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.140

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL14 component


Gene families : OG0002098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00164470

Target Alias Description ECC score Gene Family Method Actions
AT2G20450 No alias Ribosomal protein L14 0.13 OrthoFinder output from all 47 species
AT4G27090 No alias Ribosomal protein L14 0.19 OrthoFinder output from all 47 species
Adi_g022479 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Adi_g083499 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g111230 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g111231 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g00358 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ala_g21502 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Als_g22155 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Aob_g06858 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g02342 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Aop_g06833 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Azfi_s0046.g030206 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0063.g035376 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Cba_g09965 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ceric.19G039800.1 Ceric.19G039800 component *(eL14) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Ceric.27G036100.1 Ceric.27G036100 component *(eL14) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 OrthoFinder output from all 47 species
Cre17.g701200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 OrthoFinder output from all 47 species
Dac_g00245 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dac_g24709 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Dcu_g04314 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.18 OrthoFinder output from all 47 species
Ehy_g00127 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
GSVIVT01012876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder output from all 47 species
GSVIVT01027844001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder output from all 47 species
Gb_21078 No alias component RPL14 of LSU proteome component 0.15 OrthoFinder output from all 47 species
LOC_Os02g40880.1 LOC_Os02g40880 component RPL14 of LSU proteome component 0.21 OrthoFinder output from all 47 species
Len_g32744 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Lfl_g29655 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_10434733g0010 No alias component RPL14 of LSU proteome component 0.15 OrthoFinder output from all 47 species
MA_37009g0010 No alias component RPL14 of LSU proteome component 0.03 OrthoFinder output from all 47 species
MA_99106g0010 No alias component RPL14 of LSU proteome component 0.19 OrthoFinder output from all 47 species
Mp8g17070.1 No alias component RPL14 of LSU proteome component 0.19 OrthoFinder output from all 47 species
Msp_g12121 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Nbi_g01610 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ore_g03641 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g09914 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c15_5860V3.1 Pp3c15_5860 Ribosomal protein L14 0.11 OrthoFinder output from all 47 species
Pp3c24_20890V3.1 Pp3c24_20890 Ribosomal protein L14 0.11 OrthoFinder output from all 47 species
Pp3c8_25050V3.1 Pp3c8_25050 Ribosomal protein L14 0.01 OrthoFinder output from all 47 species
Ppi_g20764 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g11819 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.15 OrthoFinder output from all 47 species
Sam_g31107 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g38083 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.16 OrthoFinder output from all 47 species
Smo403602 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 OrthoFinder output from all 47 species
Solyc06g008260.3.1 Solyc06g008260 component RPL14 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Solyc06g083820.3.1 Solyc06g083820 component RPL14 of LSU proteome component 0.1 OrthoFinder output from all 47 species
Solyc09g066430.3.1 Solyc09g066430 component RPL14 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Spa_g10974 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Spa_g16062 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Spa_g16063 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Spa_g23759 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Spa_g28088 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Tin_g13393 No alias component *(eL14) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Zm00001e010296_P001 Zm00001e010296 component RPL14 of LSU proteome component 0.18 OrthoFinder output from all 47 species
Zm00001e034932_P003 Zm00001e034932 component RPL14 of LSU proteome component 0.21 OrthoFinder output from all 47 species
Zm00001e041233_P002 Zm00001e041233 component RPL14 of LSU proteome component 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005758 mitochondrial intermembrane space IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016530 metallochaperone activity IEP HCCA
MF GO:0016531 copper chaperone activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0031970 organelle envelope lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 45 117
No external refs found!