AMTR_s00040p00209530 (HSFA1E, ATHSFA1E,...)

Aliases : HSFA1E, ATHSFA1E, evm_27.TU.AmTr_v1.0_scaffold00040.220

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00040p00209530
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00270580	AT-HSFA6B,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.03	OrthoFinder output from all 47 species
Aev_g17393	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g06411	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g12580	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g18442	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07805	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g27612	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g30082	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g52565	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g05891	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g11687	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g19456	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30579.t1	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene69372.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g15368	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g78307	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g03864	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g21083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04697	HSF4, HSFB1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13990	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019829001	AT-HSFB2B, HSFB2B	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01020781001	HSFA4C, RHA1, AT-HSFA4C	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
GSVIVT01021269001	HSF A4A, AT-HSFA4A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01022134001	HSF4, HSFB1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
Gb_00558	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.04	OrthoFinder output from all 47 species
LOC_Os02g32590.1	HSFA3, AT-HSFA3,...	transcription factor (HSF)	0.07	OrthoFinder output from all 47 species
LOC_Os03g53340.2	AT-HSFA6B,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
LOC_Os06g36930.1	AT-HSFA7A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
LOC_Os08g36700.1	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os09g28354.1	HSF4, HSFB1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Len_g10124	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g27595	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g38313	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_110587g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
MA_5374g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Msp_g19596	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g21406	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g24815	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g11876	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g06498	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14485	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g24032	HSF A4A, AT-HSFA4A	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g43592	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g08271	HSFA1B, ATHSF3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09931	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13583	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g20199	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60061	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g62641	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g14010	No alias	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g40245	No alias	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo37324	ATHSF1, HSF1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
Solyc02g072000.3.1	HSF A4A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc03g006000.3.1	HSF A4A,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc03g097120.3.1	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	OrthoFinder output from all 47 species
Solyc04g078770.4.1	HSFB4, SCZ,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Solyc06g053950.3.1	AT-HSFA6B,...	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc07g055710.3.1	HSFA4C, RHA1,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc08g076590.3.1	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.03	OrthoFinder output from all 47 species
Solyc09g059520.3.1	HSFA8, AT-HSFA8,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Spa_g11248	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g17508	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26714	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g38102	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e005982_P001	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e019898_P001	AT-HSFC1, HSFC1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e024268_P001	AT-HSFB2A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Zm00001e029052_P001	HSFA4C, RHA1,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Zm00001e034336_P001	HSFB4, SCZ,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Zm00001e035680_P002	HSFB4, SCZ,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003756	protein disulfide isomerase activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	55	147

External Links

No external refs found!

AMTR_s00040p00209530 (HSFA1E, ATHSFA1E,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation