Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.224
Description : Probable amidase At4g34880 OS=Arabidopsis thaliana
Gene families : OG0004248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004248_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00041p00213600 | |
| Cluster | HCCA: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00041p00212520 | evm_27.TU.AmTr_v1... | Probable amidase At4g34880 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00041p00216070 | evm_27.TU.AmTr_v1... | Probable amidase At4g34880 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00041p00219760 | evm_27.TU.AmTr_v1... | Probable amidase At4g34880 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g13112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024066001 | No alias | Probable amidase At4g34880 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024068001 | No alias | Probable amidase At4g34880 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024070001 | No alias | Probable amidase At4g34880 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_24946 | No alias | Probable amidase At4g34880 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_24947 | No alias | Probable amidase At4g34880 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g10410.1 | LOC_Os04g10410 | Probable amidase At4g34880 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g10530.1 | LOC_Os04g10530 | Probable amidase At4g34880 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g06710.1 | LOC_Os10g06710 | Probable amidase At4g34880 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0214.g025994 | No alias | not classified & original description: CDS=1-1410 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g071550.2.1 | Solyc11g071550 | Probable amidase At4g34880 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0043531 | ADP binding | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000120 | Amidase | 42 | 115 |
| No external refs found! |
