AMTR_s00041p00215440 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.234

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana

Gene families : OG0004248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004248_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00041p00215440

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00041p00218630	evm_27.TU.AmTr_v1...	Probable amidase At4g34880 OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
AT4G34880	No alias	Amidase family protein	0.03	OrthoFinder output from all 47 species
LOC_Os04g10410.1	LOC_Os04g10410	Probable amidase At4g34880 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Solyc01g111210.3.1	Solyc01g111210	Probable amidase At4g34880 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000120	Amidase	1	335

External Links

No external refs found!