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  5. AMTR_s00042p00153000

AMTR_s00042p00153000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00042.42

Description : Probable carboxylesterase Os04g0669500 OS=Oryza sativa subsp. japonica


Gene families : OG0001188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00042p00153000

Target Alias Description ECC score Gene Family Method Actions
Cba_g25828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g33405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10229952g0010 SOBER1 SOBER/TIPSY effector-triggered immunity suppressor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003140 PLipase/COase/thioEstase 25 246
No external refs found!