AMTR_s00044p00016810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.3

No description available


Gene families : OG0000982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000982_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00016810

Target Alias Description ECC score Gene Family Method Actions
AT1G31310 No alias hydroxyproline-rich glycoprotein family protein 0.05 OrthoFinder output from all 47 species
AT2G35640 No alias Homeodomain-like superfamily protein 0.06 OrthoFinder output from all 47 species
Aspi01Gene15051.t1 Aspi01Gene15051 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34208.t1 Aspi01Gene34208 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026222001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_09025 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g46350.1 LOC_Os03g46350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_174370g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_174370g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Pir_g19517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g030460.2.1 Solyc02g030460 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g069390.2.1 Solyc02g069390 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Tin_g15445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006592_P002 Zm00001e006592 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012318_P001 Zm00001e012318 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!