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  5. AMTR_s00044p00073410

AMTR_s00044p00073410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.46

Description : Organelle RRM domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00073410

Target Alias Description ECC score Gene Family Method Actions
Adi_g003608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022268 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g043929 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068967 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078308 GR-RBP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083735 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g121412 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04150 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g06168 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24303 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_367032g0010 ATRBP31, CP31,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9594430g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Pir_g06085 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08398 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003316_P001 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Zm00001e012299_P004 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 79 148
No external refs found!