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  5. AMTR_s00044p00160130

AMTR_s00044p00160130 (NFD03, HMGB3, NFD3,...)


Aliases : NFD03, HMGB3, NFD3, evm_27.TU.AmTr_v1.0_scaffold00044.170

Description : HMG1/2-like protein OS=Glycine max


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00160130

Target Alias Description ECC score Gene Family Method Actions
Aev_g03724 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Ala_g04836 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.05 OrthoFinder output from all 47 species
Als_g36476 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000984.29 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g24076 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Gb_37400 No alias High mobility group B protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g24387 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g24838 ATHMG, HMG, SSRP1, NFD not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44031 HMGB6 DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g05596 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.04 OrthoFinder output from all 47 species
Spa_g16628 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 48 117
No external refs found!