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  5. AMTR_s00044p00196010

AMTR_s00044p00196010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.212

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00196010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00263820 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00006p00263910 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00006p00263920 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00058p00097500 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00111070 RPM1, RPS3,... Putative disease resistance protein At1g59780... 0.04 OrthoFinder output from all 47 species
AMTR_s00074p00193280 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00088p00152700 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AMTR_s00148p00037160 ZAR1,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 OrthoFinder output from all 47 species
AT1G58807 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G59124 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.03 OrthoFinder output from all 47 species
Aob_g22709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g02120.1 LOC_Os04g02120 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os06g48520.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g12330.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g17420.1 RPM1, RPS3,... no description available(sp|q2r8l1|rga5s_orysj : 165.0) 0.03 OrthoFinder output from all 47 species
LOC_Os12g29280.1 LOC_Os12g29280 Putative disease resistance protein RGA1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc04g009110.1.1 RPP13, Solyc04g009110 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g039410.3.1 Solyc07g039410 Putative disease resistance RPP13-like protein 3... 0.02 OrthoFinder output from all 47 species
Solyc07g039420.1.1 RPP13, Solyc07g039420 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e011354_P001 Zm00001e011354 no description available(sp|p0do08|pikm2_orysj : 121.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 174 320
No external refs found!