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  5. AMTR_s00044p00221140

AMTR_s00044p00221140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00044.237

Description : Reticulon-like protein B9 OS=Arabidopsis thaliana


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00044p00221140

Target Alias Description ECC score Gene Family Method Actions
AT1G68230 No alias Reticulon family protein 0.07 OrthoFinder output from all 47 species
AT3G18260 No alias Reticulon family protein 0.08 OrthoFinder output from all 47 species
AT4G01230 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
Adi_g015887 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aev_g39755 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Ala_g24666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25844 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Als_g43655 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Als_g50102 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Aop_g06337 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0058.g034449 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g04424 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g22115 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Ceric.19G012300.1 Ceric.19G012300 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Dcu_g14887 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ehy_g13025 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008336001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
GSVIVT01011845001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
GSVIVT01015864001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01028796001 No alias Reticulon-like protein B5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_10741 No alias ER-associated protein (Reticulon) 0.04 OrthoFinder output from all 47 species
Gb_41628 No alias ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os01g04640.1 LOC_Os01g04640 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
LOC_Os01g49660.1 LOC_Os01g49660 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
LOC_Os05g24770.1 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Len_g26287 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Lfl_g22278 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
MA_654072g0010 No alias ER-associated protein (Reticulon) 0.05 OrthoFinder output from all 47 species
Sam_g20068 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Sam_g26241 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Solyc03g119190.3.1 Solyc03g119190 ER-associated protein (Reticulon) 0.11 OrthoFinder output from all 47 species
Solyc05g008890.3.1 Solyc05g008890 ER-associated protein (Reticulon) 0.07 OrthoFinder output from all 47 species
Spa_g56858 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Zm00001e016413_P001 BTI1, RTNLB1,... ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Zm00001e028102_P001 Zm00001e028102 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Zm00001e032328_P001 Zm00001e032328 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 33 188
No external refs found!