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  5. AMTR_s00045p00160510

AMTR_s00045p00160510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.180

No description available


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00160510

Target Alias Description ECC score Gene Family Method Actions
AT3G25930 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13498 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37226.t1 Aspi01Gene37226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene48339.t1 Aspi01Gene48339 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G000800.1 Ceric.07G000800 not classified & original description: pacid=50627155... 0.03 OrthoFinder output from all 47 species
Ceric.1Z137100.1 Ceric.1Z137100 not classified & original description: pacid=50577015... 0.03 OrthoFinder output from all 47 species
Ceric.1Z137200.1 Ceric.1Z137200 not classified & original description: pacid=50577014... 0.03 OrthoFinder output from all 47 species
Dac_g03089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g29720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g31767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05132 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_22308 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100052g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426703g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10437265g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022124 No alias not classified & original description: CDS=790-1359 0.03 OrthoFinder output from all 47 species
Sam_g14079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo79236 No alias Universal stress protein PHOS34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g38853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02317 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g21428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 1 156
No external refs found!