AMTR_s00045p00217520 (ATSUG1, RPT6A,...)

Aliases : ATSUG1, RPT6A, evm_27.TU.AmTr_v1.0_scaffold00045.307

Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component

Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00045p00217520

Target	Alias	Description	ECC score	Gene Family Method
Aev_g07060	ATSUG1, RPT6A	regulatory component *(RPT6) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000792.28	ATSUG1, RPT6A	Protein degradation.26S proteasome.regulatory...	0.01	OrthoFinder output from all 47 species
LOC_Os02g11050.1	ATSUG1, RPT6A,...	regulatory component RPT6 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Mp1g04290.1	ATSUG1, RPT6A	regulatory component RPT6 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Pp3c1_21950V3.1	ATSUG1, RPT6A,...	regulatory particle triple-A ATPase 6A	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
MF	GO:0004576	oligosaccharyl transferase activity	IEP	HCCA
MF	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
BP	GO:0018279	protein N-linked glycosylation via asparagine	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	174	307

External Links

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