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  5. AMTR_s00045p00225160

AMTR_s00045p00225160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.318

No description available


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00225160

Target Alias Description ECC score Gene Family Method Actions
AT2G47710 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g054134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37521.t2 Aspi01Gene37521 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49546.t1 Aspi01Gene49546 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre16.g649650 No alias No description available 0.03 OrthoFinder output from all 47 species
Ehy_g08167 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_32428 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g06500.1 LOC_Os05g06500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g16126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10303844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431018g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_188861g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_58855g0010 RD2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g16930.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g29223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005689 No alias not classified & original description: CDS=1811-2371 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016731 No alias not classified & original description: CDS=1-588 0.03 OrthoFinder output from all 47 species
Solyc01g059930.3.1 Solyc01g059930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g066810.4.1 Solyc01g066810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g17338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31160 No alias HUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 11 157
No external refs found!