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  5. AMTR_s00046p00173420

AMTR_s00046p00173420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00046.96

Description : Cell wall.pectin.xylogalacturonan.synthesis.xylogalacturonan xylosyltransferase


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00046p00173420

Target Alias Description ECC score Gene Family Method Actions
Aev_g14078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38981 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09743 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012805001 No alias Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01012807001 No alias Cell... 0.01 OrthoFinder output from all 47 species
GSVIVT01012820001 No alias Cell... 0.02 OrthoFinder output from all 47 species
GSVIVT01035880001 No alias Cell... 0.02 OrthoFinder output from all 47 species
Gb_02074 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_02075 No alias Probable glycosyltransferase At3g07620 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g01930.1 LOC_Os04g01930 xylogalacturonan xylosyltransferase 0.05 OrthoFinder output from all 47 species
MA_10429289g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_125709g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_9343406g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g25094 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g18386 No alias xylogalacturonan xylosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g23570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo136816 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo229884 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc09g008720.3.1 Solyc09g008720 xylogalacturonan xylosyltransferase 0.08 OrthoFinder output from all 47 species
Tin_g03974 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g21309 No alias xylogalacturonan xylosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004263 Exostosin 3 282
No external refs found!