AMTR_s00047p00213630 (CB5-A, B5 #6,...)


Aliases : CB5-A, B5 #6, ATCB5-A, evm_27.TU.AmTr_v1.0_scaffold00047.155

Description : Cell wall.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.Cyt-b5 component


Gene families : OG0000285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00047p00213630

Target Alias Description ECC score Gene Family Method Actions
Adi_g020808 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Adi_g046971 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Adi_g125373 B5 #5, CB5LP, ATCB5LP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g127395 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Ceric.09G065200.1 B5 #5, CB5LP,... not classified & original description: pacid=50586868... 0.04 OrthoFinder output from all 47 species
Mp1g14810.1 CB5-A, B5 #6, ATCB5-A component Cyt-b5 of CER1-CER3 alkane-forming complex 0.03 OrthoFinder output from all 47 species
Ppi_g02802 B5 #5, CB5LP, ATCB5LP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14052 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015842 B5 #4, ATCB5-B, CB5-B not classified & original description: CDS=1-222 0.02 OrthoFinder output from all 47 species
Sam_g30918 No alias electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Solyc05g012080.3.1 CB5-A, B5 #6,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.05 OrthoFinder output from all 47 species
Tin_g23491 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Tin_g34799 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR001199 Cyt_B5-like_heme/steroid-bd 8 81
No external refs found!