AMTR_s00047p00228170 (ALS1, ATTAP2, TAP2,...)

Aliases : ALS1, ATTAP2, TAP2, evm_27.TU.AmTr_v1.0_scaffold00047.188

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter

Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00047p00228170

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene12421.t1	Aspi01Gene12421	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.70	ALS1, ATTAP2, TAP2	ABC transporter B family member 25 OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021434.18	ATTAP1, TAP1	ABC transporter B family member 14 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cre02.g083354	ALS1, ATTAP2, TAP2	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
LOC_Os03g54790.1	ALS1, ATTAP2,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_431919g0010	ALS1, ATTAP2, TAP2	ABC transporter B family member 25 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Smo441803	ALS1, ATTAP2, TAP2	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc03g114950.2.1	ALS1, ATTAP2,...	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Spa_g54825	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g02061	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e012019_P002	ALS1, ATTAP2,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	433	559

External Links

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AMTR_s00047p00228170 (ALS1, ATTAP2, TAP2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation