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  5. AMTR_s00048p00018580

AMTR_s00048p00018580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.2

No description available


Gene families : OG0006179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00018580
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aop_g69160 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Lfl_g32662 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR007818 SHI 64 107
No external refs found!