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  5. AMTR_s00048p00020720

AMTR_s00048p00020720 (SEC10,...)


Aliases : SEC10, evm_27.TU.AmTr_v1.0_scaffold00048.3

Description : Vesicle trafficking.target membrane tethering.Exocyst complex.SEC10 component


Gene families : OG0004639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00020720
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0682.g082038 SEC10 component *(SEC10) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
LOC_Os12g13590.1 SEC10, LOC_Os12g13590 component SEC10 of Exocyst complex 0.02 OrthoFinder output from all 47 species
Msp_g10952 SEC10 component *(SEC10) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02326 SEC10 component *(SEC10) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Spa_g19346 SEC10 component *(SEC10) of Exocyst complex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e017859_P002 SEC10, Zm00001e017859 component SEC10 of Exocyst complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006887 exocytosis IEA Interproscan
BP GO:0048278 vesicle docking IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009976 Sec10-like 470 811
No external refs found!