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  5. AMTR_s00048p00101790

AMTR_s00048p00101790 (4CL3,...)


Aliases : 4CL3, evm_27.TU.AmTr_v1.0_scaffold00048.51

Description : Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.4-coumarate:CoA ligase (4CL)


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00101790

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00217510 ACOS5,... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00217630 ACOS5,... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.02 OrthoFinder output from all 47 species
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.04 OrthoFinder output from all 47 species
Adi_g115638 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g02337 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g31792 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Als_g14523 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Als_g22886 4CL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32388 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Als_g57331 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g06612 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10029.t1 4CL1, AT4CL1,... EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Cba_g34238 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g07017 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g38297 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01024400001 4CL3 4-coumarate--CoA ligase 2 OS=Glycine max 0.08 OrthoFinder output from all 47 species
GSVIVT01029183001 AT4CL2, 4CL2 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
Gb_41091 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.07 OrthoFinder output from all 47 species
Lfl_g06579 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
MA_109119g0010 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
Nbi_g04314 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g42310 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g58116 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g16547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51306 No alias acyl-CoA synthetase *(ACS5) & original description: none 0.01 OrthoFinder output from all 47 species
Smo110329 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g097030.3.1 4CL3, Solyc03g097030 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Solyc07g008360.2.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Tin_g11239 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008138_P001 ACOS5, Zm00001e008138 acyl-CoA synthetase (ACS5) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 70 558
IPR025110 AMP-bd_C 598 625
No external refs found!