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  5. AMTR_s00048p00122750

AMTR_s00048p00122750 (AtRCD1, RCD1, ATP8,...)


Aliases : AtRCD1, RCD1, ATP8, CEO1, CEO, evm_27.TU.AmTr_v1.0_scaffold00048.66

Description : Inactive poly [ADP-ribose] polymerase RCD1 OS=Arabidopsis thaliana


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00122750

Target Alias Description ECC score Gene Family Method Actions
Adi_g087899 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.27G043700.1 AtRCD1, RCD1,... not classified & original description: pacid=50605159... 0.03 OrthoFinder output from all 47 species
Dcu_g22889 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013086001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
GSVIVT01013090001 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.03 OrthoFinder output from all 47 species
Lfl_g08396 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g03660 AtRCD1, RCD1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g005270.3.1 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.04 OrthoFinder output from all 47 species
Zm00001e023927_P003 AtRCD1, RCD1,... Inactive poly [ADP-ribose] polymerase RCD1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005639 obsolete integral component of nuclear inner membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 535 603
IPR012317 Poly(ADP-ribose)pol_cat_dom 277 422
No external refs found!