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  5. AMTR_s00048p00192930

AMTR_s00048p00192930 (NFYA5, NF-YA5,...)


Aliases : NFYA5, NF-YA5, evm_27.TU.AmTr_v1.0_scaffold00048.153

Description : RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YA component


Gene families : OG0000451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00192930

Target Alias Description ECC score Gene Family Method Actions
AT1G54160 NFYA5, NF-YA5 nuclear factor Y, subunit A5 0.02 OrthoFinder output from all 47 species
Adi_g055678 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.06 OrthoFinder output from all 47 species
Adi_g059155 HAP2A, ATHAP2A,... component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Adi_g106281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38073 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aop_g62365 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14466.t1 NF-YA7, Aspi01Gene14466 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01015120001 HAP2C, NF-YA3, ATHAP2C RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
LOC_Os03g48970.1 NF-YA9, LOC_Os03g48970 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g42400.2 NF-YA10, LOC_Os12g42400 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Len_g17484 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
MA_17313g0010 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Msp_g27644 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ore_g20033 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ore_g44130 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pir_g28685 HAP2A, ATHAP2A,... component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015535 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Solyc12g009050.3.1 NF-YA7, Solyc12g009050 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e003259_P001 NF-YA10, Zm00001e003259 component NF-YA of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Zm00001e005004_P001 NF-YA10, Zm00001e005004 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e012396_P001 NF-YA10, Zm00001e012396 component NF-YA of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001289 NFYA 183 239
No external refs found!