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  5. AMTR_s00049p00109000

AMTR_s00049p00109000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.83

No description available


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00109000
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00074340 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g30403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19654.t1 Aspi01Gene19654 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19654.t2 Aspi01Gene19654 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_121354g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g06131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022735_P001 Zm00001e022735 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 227 334
No external refs found!