AMTR_s00049p00189540 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.196

Description : Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type)

Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00049p00189540

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00135940	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00060p00071170	evm_27.TU.AmTr_v1...	Solute transport.carrier-mediated transport.MOP...	0.04	OrthoFinder output from all 47 species
AT3G23550	No alias	MATE efflux family protein	0.03	OrthoFinder output from all 47 species
GSVIVT01012739001	No alias	Solute transport.carrier-mediated transport.MOP...	0.04	OrthoFinder output from all 47 species
Gb_22184	No alias	metabolite transporter (DTX)	0.07	OrthoFinder output from all 47 species
LOC_Os10g20380.1	LOC_Os10g20380	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
LOC_Os10g20390.1	LOC_Os10g20390	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
MA_10436271g0010	No alias	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
MA_422549g0010	No alias	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
MA_790852g0010	No alias	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
MA_9267g0020	No alias	metabolite transporter (DTX)	0.04	OrthoFinder output from all 47 species
Tin_g41035	No alias	metabolite transporter *(DTX) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006855	xenobiotic transmembrane transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0042908	xenobiotic transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002528	MATE_fam	1	113
IPR002528	MATE_fam	174	335

External Links

No external refs found!