AMTR_s00049p00211440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.238

Description : Vesicle trafficking.autophagosome formation.cargo recruitment.NBR1 autophagic adapter protein


Gene families : OG0000431 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00211440

Target Alias Description ECC score Gene Family Method Actions
Adi_g008077 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Adi_g083183 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.05 OrthoFinder output from all 47 species
Adi_g113227 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g07387 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Als_g13865 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Als_g39218 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011922 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g03308 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Cba_g11645 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g08201 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08495 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007647001 No alias Vesicle trafficking.autophagosome formation.cargo... 0.03 OrthoFinder output from all 47 species
LOC_Os02g38050.1 LOC_Os02g38050 NBR1 autophagosome autophagic adapter protein 0.04 OrthoFinder output from all 47 species
Lfl_g10374 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Msp_g13142 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g08026 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g11764 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g22788 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g04296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11527 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003006 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003007 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.04 OrthoFinder output from all 47 species
Spa_g07741 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10363 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Tin_g11535 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g20736 No alias autophagosome cargo receptor protein *(NBR1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e014993_P002 Zm00001e014993 NBR1 autophagosome autophagic adapter protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 6 86
IPR000433 Znf_ZZ 358 394
No external refs found!