AMTR_s00049p00216010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.248

No description available


Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00216010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00172620 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00173430 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G52342 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G67910 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT5G11090 No alias serine-rich protein-related 0.03 OrthoFinder output from all 47 species
Adi_g044951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08787 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g20522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11466.t1 Aspi01Gene11466 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43626.t1 Aspi01Gene43626 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G029500.1 Ceric.29G029500 not classified & original description: pacid=50625444... 0.02 OrthoFinder output from all 47 species
Ceric.31G052300.1 Ceric.31G052300 not classified & original description: pacid=50574066... 0.03 OrthoFinder output from all 47 species
Ceric.32G012100.1 Ceric.32G012100 not classified & original description: pacid=50598160... 0.02 OrthoFinder output from all 47 species
Ceric.32G012200.1 Ceric.32G012200 not classified & original description: pacid=50597588... 0.04 OrthoFinder output from all 47 species
Ceric.32G044400.1 Ceric.32G044400 not classified & original description: pacid=50598340... 0.03 OrthoFinder output from all 47 species
Dcu_g29877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g30520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012865001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01014741001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_11274 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_27597 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_27599 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_29842 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36288 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37761 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g32469.1 LOC_Os02g32469 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g55600.1 LOC_Os02g55600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g55610.1 LOC_Os02g55610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g20600.1 LOC_Os03g20600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g22683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_103063g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_126512g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18091g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_229862g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_519042g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_75170g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8661271g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_94560g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9485570g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g65153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008383 No alias not classified & original description: CDS=1-396 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015803 No alias not classified & original description: CDS=1-222 0.02 OrthoFinder output from all 47 species
Solyc07g007330.1.1 Solyc07g007330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g00539 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g16745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016142_P001 Zm00001e016142 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e023673_P001 Zm00001e023673 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e040161_P001 Zm00001e040161 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!