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  5. AMTR_s00050p00205080

AMTR_s00050p00205080 (BAM1, BMY7, TR-BAMY,...)


Aliases : BAM1, BMY7, TR-BAMY, evm_27.TU.AmTr_v1.0_scaffold00050.65

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase


Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00050p00205080

Target Alias Description ECC score Gene Family Method Actions
AT3G23920 BAM1, BMY7, TR-BAMY beta-amylase 1 0.05 OrthoFinder output from all 47 species
AT4G17090 BMY8, BAM3, CT-BMY chloroplast beta-amylase 0.04 OrthoFinder output from all 47 species
Adi_g013459 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17221 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05070 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06607 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15788 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25032.t1 BAM1, BMY7,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0319.g064428 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: CDS=328-2121 0.02 OrthoFinder output from all 47 species
Ceric.02G049300.1 BAM1, BMY7,... EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Cre06.g270350 BMY8, BAM3, CT-BMY Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cre06.g307150 BAM1, BMY7, TR-BAMY Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Ehy_g05980 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02987 BMY8, BAM3, CT-BMY Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_26014 BMY8, BAM3, CT-BMY beta amylase 0.03 OrthoFinder output from all 47 species
LOC_Os10g41550.1 BMY8, BAM3,... beta amylase 0.04 OrthoFinder output from all 47 species
Len_g08375 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19095 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22821 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30972 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_124514g0010 BAM1, BMY7, TR-BAMY beta amylase 0.03 OrthoFinder output from all 47 species
Msp_g12589 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19045 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22861 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12697 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022726 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: CDS=1-1839 0.02 OrthoFinder output from all 47 species
Solyc01g067660.3.1 BAM9, BMY3,... beta amylase 0.03 OrthoFinder output from all 47 species
Zm00001e002383_P001 BMY8, BAM3,... beta amylase 0.02 OrthoFinder output from all 47 species
Zm00001e037830_P001 BMY8, BAM3,... beta amylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 127 545
No external refs found!