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  5. AMTR_s00053p00122010

AMTR_s00053p00122010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.69

Description : Probable calcium-binding protein CML35 OS=Arabidopsis thaliana


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00122010

Target Alias Description ECC score Gene Family Method Actions
Adi_g081283 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34437 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11000 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12792 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34152 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14419.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30068.t1 Aspi01Gene30068 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40088.t1 Aspi01Gene40088 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63367.t1 Aspi01Gene63367 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37370 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10925 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02760 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10805 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11523 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14256 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03899 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g04330.1 LOC_Os01g04330 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_1190858g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08155 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39035 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19481 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g068960.1.1 Solyc06g068960 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g09952 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45182 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 161 222
No external refs found!